PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168849.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 669aa MW: 77483.9 Da PI: 6.1276

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.2e-23	60	143	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YA++ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r++trtgC a++k +++++++w+v+++eleHnH l+p XP_027168849.1 60 FYNCYAQQQGFGVRVSNTWYR-KSKEKYRGKLSCSSAGFKKKTEAN-----RPRPQTRTGCPAMIKFRLMENKRWRVIEVELEHNHLLTP 143 9*************99997.66779**********98877.....*********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MDEVSLNSEP VYDDEAENFE IDGDCAMTEY VGEAGVLQGE NPLPPAVGME FETYEDVYYF 60 YNCYAQQQGF GVRVSNTWYR KSKEKYRGKL SCSSAGFKKK TEANRPRPQT RTGCPAMIKF 120 RLMENKRWRV IEVELEHNHL LTPTSGKFYK SHRNVGLGSK RPLQVDGPEE IQKIRLFRTV 180 IIDTEYNGSA NVDEGKVRNN VDQFNNQLRL KQGDAQSIHK FFTHQQLMNP NFFYVMDLNE 240 KGCLRNVFWA DARSRATYGY FGDVVVIDTS CLTSKHEVPL VILTGVNHHG HSVLLGCGLV 300 AGGNVESYIW LFRAWLTYMV GRSPHAIITD QNKSLKIALA EVFPRASHFI SMTSILKQLP 360 HELGGVSECE AIMEAFTRLV YDPFRAVDFE AAWEDMMDRH GIRQYKWLQT LYEDRKHWVP 420 VYIKETFLAG MFPMKESERV TSPFEGYLSK DTSLKDFLNS YDQALKEIDQ REVMADMESR 480 NPCGMLKSTF YLELQLSKLY TSNIFMKFQE EVVGMLSCFN PRQMSMDGSV ISYLVTEHAE 540 VEDNRRETRD FEVSYNTSDG EILCLCGLFS FKGYLCRHAL CVLNQNGVEE IPPQYILSRW 600 RKDIHRNYDF EYGYDGIDSN NPLHRYDNLY KCITKVVEEG RKSHDRYKYT LQALDDILSK 660 IRLQDDQLV

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MDEVSLNSEP VYDDEAENFE IDGDCAMTEY VGEAGVLQGE NPLPPAVGME FETYEDVYYF  60
YNCYAQQQGF GVRVSNTWYR KSKEKYRGKL SCSSAGFKKK TEANRPRPQT RTGCPAMIKF  120
RLMENKRWRV IEVELEHNHL LTPTSGKFYK SHRNVGLGSK RPLQVDGPEE IQKIRLFRTV  180
IIDTEYNGSA NVDEGKVRNN VDQFNNQLRL KQGDAQSIHK FFTHQQLMNP NFFYVMDLNE  240
KGCLRNVFWA DARSRATYGY FGDVVVIDTS CLTSKHEVPL VILTGVNHHG HSVLLGCGLV  300
AGGNVESYIW LFRAWLTYMV GRSPHAIITD QNKSLKIALA EVFPRASHFI SMTSILKQLP  360
HELGGVSECE AIMEAFTRLV YDPFRAVDFE AAWEDMMDRH GIRQYKWLQT LYEDRKHWVP  420
VYIKETFLAG MFPMKESERV TSPFEGYLSK DTSLKDFLNS YDQALKEIDQ REVMADMESR  480
NPCGMLKSTF YLELQLSKLY TSNIFMKFQE EVVGMLSCFN PRQMSMDGSV ISYLVTEHAE  540
VEDNRRETRD FEVSYNTSDG EILCLCGLFS FKGYLCRHAL CVLNQNGVEE IPPQYILSRW  600
RKDIHRNYDF EYGYDGIDSN NPLHRYDNLY KCITKVVEEG RKSHDRYKYT LQALDDILSK  660
IRLQDDQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein