PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168293.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 288aa MW: 33095.1 Da PI: 9.5949

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	123	146	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C+k F+ +L +H + H XP_027168293.1 123 WRCGYCKKIFRAEKYLDQHFDNrH 146 58*****************77666 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MGKKKITGMV YTNNERITHL VIPFIYLLML SGLSSVSSAF SQPNLQGTDN PGSRTLKQED 60 PPVHEVHCSR ERSRAAWNII DQYLMPFVEK EKYQLSSQCR LNASNDLFRD QEEHKIHYDA 120 NEWRCGYCKK IFRAEKYLDQ HFDNRHSNLL NSNGKCLADV CGALHCDLMM DSKPRKSKCN 180 PAAAAKNRHL CESLADSCFP VNQGHSATRL HDLFLRQFCD AHTCSGGKKP FSRGGRKHTN 240 VFYLAISILT MMLLPIFYLI VYLYQREMRK GTQELKRISK IGRKTKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63280.1	1e-111	C2H2 family protein