PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027166625.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 265aa    MW: 28691.1 Da    PI: 7.5553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027166625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19119169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_027166625.1 119 HFRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAYRMRG 169
                     69*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MYHPISAELP PANSSGEFPA YRRSSSFSSL VPCLTETWGD LPLKVDDSED MVIYWLLRDA  60
VNVGWSPFNL TAASDVSVDV RVKAEPSDAP EPATTSPAAD HCSAPPPATA GAAQPKGRHF  120
RGVRQRPWGK FAAEIRDPAK NGARVWLGTY ETAEEAALAY DRAAYRMRGS KALLNFPHRV  180
GLNEPEPVRV TAKRRSPEQA ASSPSSVSSA SESGSPSPSP KRRRKVVAAE LSAEPEPEVE  240
SQSNAYRRVN CQMTHVPVGE QLLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220226PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-49ERF family protein