PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027165580.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 426aa    MW: 46932.1 Da    PI: 7.435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027165580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.9e-19252300355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  XP_027165580.1 252 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYMLRG 300
                     8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MQKELPALFT VTPEGSRFLM DPNCISGGLN ESFCIDSGGG CNAKSSSASL DRLISSPESS  60
SSIEEASASN MNGIKFSEFS EQKDMLKGYD AHSLLSGSAT FDNFSGSSSA QNTGSHIPLN  120
FLESFPAINE AQLREPCPSP PSKFPNLGLF LQEPSFMDVS RKATESLGKS QKREPMQLCS  180
QNPLFPISEM GKSQLLPWLK ISQNITNNSS KGFSDYWLST TKTTPMKFTG RRIQNGNQKT  240
SLSSISSPGK LFRGVRQRHW GKWVAEIRLP RNRTRVWLGT FDTAEEAAFA YDTAAYMLRG  300
DYAHMNFPDL KHQFKANSIS CSTAALLEAK LQAISQGLPA TKKSTELPIS QPKSVLHENS  360
RFKSLNIQVP AIKEWPLDLG CKIESGEMID IKKSQESLVD TEAVQLSRMP SLDMDTIWDA  420
LLVPDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.19e-67ERF family protein