PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027163252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 303aa MW: 33228.3 Da PI: 7.9501 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.5e-20 | 154 | 203 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa+a+++a+ +++g XP_027163252.1 154 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEDAARAYDRAAIEFRG 203 59*******.**********94....36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MQRSNKRLKQ EGIPLTSSHA TSILPPPLPP PPPPRMITSE QEVSVMVAAL KNVIAGASTA 60 TTTTTTTTAT PYADANTLHD LRLFPPSLFE CATASSSSSS AFFNANNLVV PAAAVQTCQL 120 CGYEGCLGCN YFSPSVAPVE DNNKKNGVKR KKKNYRGVRQ RPWGKWAAEI RDPRKAARVW 180 LGTFETAEDA ARAYDRAAIE FRGPRAKLNF PFSDYTLDGH QSSGSSQQVP ERDQHHHHLP 240 HKQLQPEIKA KNEIVDTSGM ELGTSNAMEF WEAIGEEEIQ QWMMMMDFQG HSSSSGSGNV 300 HSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 6e-26 | ERF family protein |