PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027162601.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 378aa MW: 42936 Da PI: 4.6563

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027162601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.8	4.8e-35	13	104	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+ ++ ++sws n++sf+v+++ ef++++Lp+yFkh+nf+SFvRQLn+YgF+k++ e+ weF+++ F +g+ +ll++ XP_027162601.1 13 FLTKTYEMVDDPLTNAIVSWSCNNRSFIVWNPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANDDFVRGQPHLLKN 98 9******************999************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_027162601.1 99 IYRRKP 104 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDEPCSSNAL PPFLTKTYEM VDDPLTNAIV SWSCNNRSFI VWNPPEFSRD LLPNYFKHNN 60 FSSFVRQLNT YGFRKIDPEQ WEFANDDFVR GQPHLLKNIY RRKPVHSHSG QGAVESQLSE 120 SERRRYKDDI ERLKSDKEAL LFELQRYKQE EQRFELQVLG TTESVQLMEQ KQKNMMSFLS 180 KILQRPILAL ELMPEPHIHE RKRRIPGNSY LNEDISRANT QINSQILQKE HLDASSLLAF 240 NKDLLEELDS TLSFWENILI NVGQACDRLT SSPALVESTS CAGSPVVSYT EPNANDVSVG 300 PKISEIDMDC DQNTNTAVIN DTANSDELVA MNSTNVPTNG PTGVNDVFWE QFLTENPGSS 360 NSSEVKVNIM IMAGFGGT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDEPCSSNAL PPFLTKTYEM VDDPLTNAIV SWSCNNRSFI VWNPPEFSRD LLPNYFKHNN  60
FSSFVRQLNT YGFRKIDPEQ WEFANDDFVR GQPHLLKNIY RRKPVHSHSG QGAVESQLSE  120
SERRRYKDDI ERLKSDKEAL LFELQRYKQE EQRFELQVLG TTESVQLMEQ KQKNMMSFLS  180
KILQRPILAL ELMPEPHIHE RKRRIPGNSY LNEDISRANT QINSQILQKE HLDASSLLAF  240
NKDLLEELDS TLSFWENILI NVGQACDRLT SSPALVESTS CAGSPVVSYT EPNANDVSVG  300
PKISEIDMDC DQNTNTAVIN DTANSDELVA MNSTNVPTNG PTGVNDVFWE QFLTENPGSS  360
NSSEVKVNIM IMAGFGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	3e-93	HSF family protein