PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027161774.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 285aa    MW: 30657.2 Da    PI: 9.4706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027161774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-201969256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  XP_027161774.1 19 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 69
                    58*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MAPRDKAASA NPGIAKEMHF RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD  60
AAAREFRGAK AKTNFPLPEE HNGNLSQNML RLTTVNLNLK DQNNFVKTNN NTNTNVNTNN  120
GSPSSQSSTV ESSSREAFSP VVAVADSSSS PLDLSLGGSM NVKFAFPNQN QQQFRLSPFA  180
GRFAGVMQPP AVNASRAFFF DALARHAMVK PDHSVLNPHR VTVAVDFLGV GAAAAAAAGA  240
IGVQSESDSS SVVVDLNRAD VKPLETNYEL NLDLDLNMPP PSENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-26ERF family protein