PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027161341.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 581aa    MW: 64727.8 Da    PI: 4.3823
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027161341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.85.2e-5491361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdeelv +yL++k+ gk+++l ++i+e+diyk+ePw+Lp k ++k+++ ewyfFs  dkky +g+r+nrat++gyWk+tgkd++v 
  XP_027161341.1   9 LAPGFRFHPTDEELVRYYLRRKLCGKPFRL-DAISEIDIYKAEPWELPgKsRLKTRDLEWYFFSVLDKKYGNGSRTNRATEEGYWKTTGKDRPVR 102
                     579***************************.99***************6347777888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k+++vg+kktLv+++grapkg++t+Wvmheyrl
  XP_027161341.1 103 H-KSQVVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 136
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    
MFSKTSTSLA PGFRFHPTDE ELVRYYLRRK LCGKPFRLDA ISEIDIYKAE PWELPGKSRL  60
KTRDLEWYFF SVLDKKYGNG SRTNRATEEG YWKTTGKDRP VRHKSQVVGM KKTLVYHSGR  120
APKGQRTNWV MHEYRLIDEE LEKAGIVQDA FVLCRVFQKS GSGPKNGEQY GAPFVEEEWE  180
EDELEMVPKE EAAEEVEVGD DSYWDGIDLD QILGTEISPD NDHMLNIVAG ENVASVEENT  240
DSSNDPQKLL VSNLPLEFYS GENASGGEET TGSNNDSQNH LVGAGEYNCV PEQSDDQNSY  300
NLPVHYDLHQ KAVKREYIGE PSNALDAENV NYLLDEPYMD ALDNLQFDDG AFLETNDLSN  360
PIAADTSAFG MLEEYLNFYD ADGEIPPYMN HDLPEMMGIN ETLVSGQASI LPKESEEKAQ  420
SAEESSEKLL GHGDVASSSK EEPTKEYFQY PFIKQASRML GSIPAPPAFA SEFPSEDATL  480
LLHPSSSSTA HITAGMIQIG NIGPGSHGMD WLFGKHGRYN VVLSFGLSRG DDNSTTLESV  540
VSIRPGKAAA SGMSRGWFCF IFFWVLVLSV GFKIGTCICA R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-137NAC family protein