PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027161063.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 725aa MW: 78915 Da PI: 8.9746

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027161063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31	4.3e-10	423	460	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + XP_027161063.1 423 FEHflHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVR 460 554459******************************88 PP
2	BELL	121	5.2e-39	287	358	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqe+q+kkakL+s+l+eV++rY+qy++q+q+v++sFe++ag+gsak+Yt+lAl++iS++FrcLkdai+ qi XP_027161063.1 287 QRQEIQMKKAKLVSMLDEVEQRYRQYHHQMQIVVASFEQAAGIGSAKSYTQLALQTISKQFRCLKDAISAQI 358 69********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MAMYYQGSSE IQADGLQTLY LMNPNYAGGY SDAQQQPANM VILNYATGNT VNLASLASNQ 60 QPHTQHLVGV PLQGSLGSAA NSHELKHEVS APGRGGIPHF HPSLWGSLDH TGGAGAASQP 120 NIPSGVVVSN PSGGGAADVT RHLGFHRPVV SPRQQGLSLS LSSQQPGFRS LSTEQNISVQ 180 TPVGILSPRS GDNNLRGSGG SSSSVSAVSN GIHGLQSAVF GSKYLKAAQQ LLDELVNVGK 240 EIKSDTREKA KDKGKMNRES TVHSTGEASQ IGQSDTKSGV TELTAAQRQE IQMKKAKLVS 300 MLDEVEQRYR QYHHQMQIVV ASFEQAAGIG SAKSYTQLAL QTISKQFRCL KDAISAQIKS 360 ASKSLGEEES LGGKLEGSRL KFVDQQLRQQ RALQQLGMMQ NNTWRPQRGL PERAVSVLRA 420 WLFEHFLHPY PKDSDKQMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY LEETKNHEQD 480 GSESNKELGS TSTTPKENNV TRIDQRSILQ SKQEKQIAQD ATHAEISTSS LTPSPTGTSP 540 QARGGFGLIG ALNMEANVEK NSKKMRTEMQ NSPSSILSVD MEMKFGEPRK GFDNKFSTSQ 600 RETNKDGFSL MVNNAGQGNG FGAFNLGELG QFNPEQLTTG FHGNSVSLTL GLPPSENLAL 660 SAGTQQNYLS DQNMGLEDRL EMGTMDGHYD RVNKTQTSHS SLGYETINFD NRKRFAAQLL 720 PDFVT

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MAMYYQGSSE IQADGLQTLY LMNPNYAGGY SDAQQQPANM VILNYATGNT VNLASLASNQ  60
QPHTQHLVGV PLQGSLGSAA NSHELKHEVS APGRGGIPHF HPSLWGSLDH TGGAGAASQP  120
NIPSGVVVSN PSGGGAADVT RHLGFHRPVV SPRQQGLSLS LSSQQPGFRS LSTEQNISVQ  180
TPVGILSPRS GDNNLRGSGG SSSSVSAVSN GIHGLQSAVF GSKYLKAAQQ LLDELVNVGK  240
EIKSDTREKA KDKGKMNRES TVHSTGEASQ IGQSDTKSGV TELTAAQRQE IQMKKAKLVS  300
MLDEVEQRYR QYHHQMQIVV ASFEQAAGIG SAKSYTQLAL QTISKQFRCL KDAISAQIKS  360
ASKSLGEEES LGGKLEGSRL KFVDQQLRQQ RALQQLGMMQ NNTWRPQRGL PERAVSVLRA  420
WLFEHFLHPY PKDSDKQMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY LEETKNHEQD  480
GSESNKELGS TSTTPKENNV TRIDQRSILQ SKQEKQIAQD ATHAEISTSS LTPSPTGTSP  540
QARGGFGLIG ALNMEANVEK NSKKMRTEMQ NSPSSILSVD MEMKFGEPRK GFDNKFSTSQ  600
RETNKDGFSL MVNNAGQGNG FGAFNLGELG QFNPEQLTTG FHGNSVSLTL GLPPSENLAL  660
SAGTQQNYLS DQNMGLEDRL EMGTMDGHYD RVNKTQTSHS SLGYETINFD NRKRFAAQLL  720
PDFVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	5e-87	TALE family protein