PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027160032.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 334aa    MW: 36868.3 Da    PI: 7.4476
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027160032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.72.3e-23132193159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqKe+ ++++pr Y+rCt++   gC+++k+v+r +e+p + ++tY g+H+++
  XP_027160032.1 132 VEDGHAWRKYGQKEILNTTYPRCYFRCTHKhdqGCKATKQVQRIKEEPVMYQTTYFGHHTCS 193
                     58***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDLPNPQQLR TIQETVIGKL LKGKESATQL VALLKKPRSS GDRGGSVSAE ELALQISRSF  60
SESISAFSSL EGKGNGICQI VAADGVVRVS SVDRGSSKTS DNSRKRLGVK DRRGCYRRRN  120
VAQSSIIVSS TVEDGHAWRK YGQKEILNTT YPRCYFRCTH KHDQGCKATK QVQRIKEEPV  180
MYQTTYFGHH TCSDTLMRAP QIISDTDPMD SCLLSFETKA PIKQNLLYPN RVMTTATATG  240
NQEFKDETQS DVSDNKSCLD SSTMLQNPTT NSETSGRRSS NVNGAYHEEV VSGMHSCSST  300
PLQGLDMEDF STKFDDLDDH LLFDDMAGLL PALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-37WRKY family protein