PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027159678.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 631aa MW: 70110.5 Da PI: 4.8924

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027159678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.9	6.9e-52	10	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeel+++yL+ k++g + ++ ++i+evdi+k ePwdLp ++v++ ++ew+fF+++d+ky++g+r nrat +gyWkatgkd+++ XP_027159678.1 10 LPVGYRFRPTDEELIDHYLRLKINGFDKDV-SIIREVDICKREPWDLPvlSRVESYDNEWFFFCPKDRKYQNGQRLNRATMKGYWKATGKDRNIR 103 799**********************999.89***********6448999999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++kg+++g+kktLvfy+grap+g++t+Wv+heyr+ XP_027159678.1 104 TRKGTKIGMKKTLVFYTGRAPDGQRTNWVIHEYRA 138 *******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGFDKDVS IIREVDICKR EPWDLPVLSR 60 VESYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRTRKGTKI GMKKTLVFYT 120 GRAPDGQRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLDEVET 180 IVPSPTTEKS PLEDGNSEAL TPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC 240 SLSAEEKGQV IDPTCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC 300 NPVSNDINCD AKSMASQYGT NTYDVNKFLN SVLVNSDEYS YEESCINAIS TVECGTPGDT 360 KPMNGAFVRD GGSCSDSEAE VTQGQFEAGF FESELFMGNI EGYGTLQMAN MEQDAHRADV 420 SIDNQEGKLN LAGNNHLGHN AYAAVFNGSV VPDFLSTEVP GVHNNDTGTD STSGTGIKLR 480 SRQFQNFSNN PTFAAHGIAP RRLRLQNKLQ IGPVQCSLLR ESVCTEENDD GQSAVTEDEK 540 ATKRNTDAAY TEEKGDVLLK KCNKNVGGST VGLRESRGEF LSTYIKNCVR APSKEDWLQV 600 VPSPMFMRKI FVIITILVVF IGIWQFFGVQ K

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGFDKDVS IIREVDICKR EPWDLPVLSR  60
VESYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRTRKGTKI GMKKTLVFYT  120
GRAPDGQRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLDEVET  180
IVPSPTTEKS PLEDGNSEAL TPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC  240
SLSAEEKGQV IDPTCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC  300
NPVSNDINCD AKSMASQYGT NTYDVNKFLN SVLVNSDEYS YEESCINAIS TVECGTPGDT  360
KPMNGAFVRD GGSCSDSEAE VTQGQFEAGF FESELFMGNI EGYGTLQMAN MEQDAHRADV  420
SIDNQEGKLN LAGNNHLGHN AYAAVFNGSV VPDFLSTEVP GVHNNDTGTD STSGTGIKLR  480
SRQFQNFSNN PTFAAHGIAP RRLRLQNKLQ IGPVQCSLLR ESVCTEENDD GQSAVTEDEK  540
ATKRNTDAAY TEEKGDVLLK KCNKNVGGST VGLRESRGEF LSTYIKNCVR APSKEDWLQV  600
VPSPMFMRKI FVIITILVVF IGIWQFFGVQ K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	3e-86	NAC family protein