PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027158847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HB-other | ||||||||
Protein Properties | Length: 514aa MW: 57294.7 Da PI: 7.0617 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.6 | 4.5e-18 | 16 | 71 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+e+Le+l+ +++yp+++ +ee Ak++gLte+qV+ WF+ rR k+k+ XP_027158847.1 16 KKRIVKTRAQVEALEKLYDEHKYPTEALKEEFAKSVGLTEKQVSGWFCHRRLKDKR 71 89****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 514 aa Download sequence |
MGEHSEDDKV LPEMNKKRIV KTRAQVEALE KLYDEHKYPT EALKEEFAKS VGLTEKQVSG 60 WFCHRRLKDK RLANPEAYAN GRQDRSSGIL QDRGSGLRQD SCGSTKQGDD RNYDPREVES 120 RRLVGQEYSA ADLTYELGSH YTGNHGSADD TSSGSSSSLR NMSFPQDRDR FALANSRYQA 180 QSLPMEIKEV KPRTGPSGYL KVKGQVENAA ITAVKRQLGR HYRADGPPLG VEFDPLPPGA 240 FESSIQEPPN ESYYAEEAVL PRSPENSMVH KNSNLGSGSQ YNPKASSHDS DMERTRFKMA 300 HGPDRSENCF PPKSKQKSPL HNHGDFYAGR SSSMDIHEGS ARKTRVYDSQ DPDRKAKYGD 360 GGMSLDSFSG HRHSRLHNPR VDSDHADPWL QNYNDMNSNV APAEHFVSKS SNLASKGVEY 420 DDFTHKGLSK RMAKEAKSSG ERLTLNGNFD PVQPKNGLTS AKRVGNELPQ EHYSKKTSWS 480 EVPPWTNQAP RSAAEMPTSF SEDDETADTS SSVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 1e-70 | HB-other family protein |