PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027157713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 23207.1 Da PI: 5.8672 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.9e-20 | 103 | 154 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp++ g r++lg++ t+e+Aa a+++a+ +++g+ XP_027157713.1 103 RYRGVRRRP-WGKFAAEIRDPKKKG--SRIWLGTYETPEDAALAYDQAAFEMRGA 154 59*******.**********96643..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MMQEATSMDS DLALLSFFEN HLLNDSDFQD IISEINCYDP PICNPSTSFG SSHLFGSGIE 60 MISNTSTSNN SSETEGNLDQ LCEEVNQKPV PARGRQAPVE WIRYRGVRRR PWGKFAAEIR 120 DPKKKGSRIW LGTYETPEDA ALAYDQAAFE MRGAKARLNF PNLFGSNTLQ PVRVNPRKRS 180 LEPSVSCCST EKDVPKKGKF EVSSMMI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-45 | ERF family protein |