PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157492.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 453aa MW: 50966.4 Da PI: 7.1401

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53	6.3e-17	99	187	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +k +++s+v+ +l+lpk+f++ h ++k ++ ++l de+g++++ k+ ++k++ l++GW++F a++L egD++vF+l++ l+v + XP_027157492.1 99 VKHMLRSHVTGGFWLSLPKQFCDIH-LPK-KNDIVVLVDENGEEYKTKYLVEKNG----LSGGWRGFSIAHNLLEGDVLVFQLIKPCV--LKVYI 185 688999**************666.554.3458***********777777....*********************998444..47777 PP E- CS B3 97 fr 98 +r XP_027157492.1 186 VR 187 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MAISQFSPSK RSQYDPSTKL KQRKASEFKK KLVKKNPCGT QHDKINKGET HNIEKPLISY 60 KKIGDKTADH SAYGKPKSSA LHRAHEVQAK LPSNFPSCVK HMLRSHVTGG FWLSLPKQFC 120 DIHLPKKNDI VVLVDENGEE YKTKYLVEKN GLSGGWRGFS IAHNLLEGDV LVFQLIKPCV 180 LKVYIVRANG LTELDGAICL LNLDFQDKSI DNEENEDVKN CKTAELDYSG PLANVLERGI 240 VAVSSGHMPE SARSANDNNE LSLEVLDGVR FSESDMQFKD VKDFNGFSIL VDGLVIDSEI 300 PLHLRAKYYQ LCCSQNSFLH DHLIKGLNCK LAAGIISETV NIADAIRAAK LKTSCEYLQT 360 WDKTLKAFED MGMAVEFLRA RIKALISLPT EQEESMKSKT AERAQLQEEM RNLETKLLNV 420 KEVIRTLDAD IKALEVQEEN LEEIFKEKVT APW

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MAISQFSPSK RSQYDPSTKL KQRKASEFKK KLVKKNPCGT QHDKINKGET HNIEKPLISY  60
KKIGDKTADH SAYGKPKSSA LHRAHEVQAK LPSNFPSCVK HMLRSHVTGG FWLSLPKQFC  120
DIHLPKKNDI VVLVDENGEE YKTKYLVEKN GLSGGWRGFS IAHNLLEGDV LVFQLIKPCV  180
LKVYIVRANG LTELDGAICL LNLDFQDKSI DNEENEDVKN CKTAELDYSG PLANVLERGI  240
VAVSSGHMPE SARSANDNNE LSLEVLDGVR FSESDMQFKD VKDFNGFSIL VDGLVIDSEI  300
PLHLRAKYYQ LCCSQNSFLH DHLIKGLNCK LAAGIISETV NIADAIRAAK LKTSCEYLQT  360
WDKTLKAFED MGMAVEFLRA RIKALISLPT EQEESMKSKT AERAQLQEEM RNLETKLLNV  420
KEVIRTLDAD IKALEVQEEN LEEIFKEKVT APW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	8e-42	B3 family protein