PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027157068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | DBB | ||||||||
Protein Properties | Length: 243aa MW: 27514.7 Da PI: 6.9361 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.5 | 2.4e-07 | 4 | 45 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ ++ +e++ fC ++ lC+ C H+ H++ XP_027157068.1 4 QCDVCNTEEASVFCSADEAALCQACDHRVHHAnklaskhHRF 45 7****************************6445888886766 PP | |||||||
2 | zf-B_box | 26.9 | 9.8e-09 | 55 | 92 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ llC++C Hk Ht XP_027157068.1 55 SPFCDICQERRALLFCQQDRALLCRECDIPVHKAnqHT 92 679*****************************877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MKIQCDVCNT EEASVFCSAD EAALCQACDH RVHHANKLAS KHHRFSLLHH PLKDSPFCDI 60 CQERRALLFC QQDRALLCRE CDIPVHKANQ HTQKHDRFLL TGVRLSASSS ANQTPSSSTV 120 SYAAGSTRTA KTESKSASSV NDPHNLRANS TAKTSKSTSN HLSFEIESHW TNQEGSVATS 180 SISEYLTETL PGWHVEDFLD PPSSFPYGLQ HSCFFFFLFL FYNILSWWWN GVMLIQETWQ 240 YSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75540.1 | 1e-64 | DBB family protein |