PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027155751.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 190aa    MW: 22726.6 Da    PI: 9.6415
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027155751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.6e-1511101194
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     f+k l+ +d +++  +++p +f++++  +++++++++   +++  +sW v++  rkk++  y+ +  W +Fvk+++Lk gD ++F+l+++++f  
  XP_027155751.1  11 FIKLLM-EDDFTRE-IRIPYSFVRNFkeKLPSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF-- 99 
                     566664.4555555.8*******9888888888888888888888*******..888888677889*********************987766.. PP

                     EE CS
              B3  93 vv 94 
                     +v
  XP_027155751.1 100 RV 101
                     44 PP

Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEQNYNFNPS FIKLLMEDDF TREIRIPYSF VRNFKEKLPS RCTIESEAKN SVRNSWPVRI  60
RKKGRYYYIC RLSWPKFVKD HHLKLGDYLL FHLIDKTTFR VKPYGADCCP KKFNVYNSSS  120
SSSDDESDDG SDESFDDSDE TEFYRDDGIR PSKVHPAKKK VYTKYQIDRD NFRSNKFKKL  180
RKTRKSGEMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09780.14e-09B3 family protein