PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027154431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SBP | ||||||||
Protein Properties | Length: 449aa MW: 49409.4 Da PI: 9.0678 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.4 | 1.3e-40 | 173 | 250 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+hkvC+ hsk+p+v+v+gle+rfCqqCsrfh+l+efDe+krsCrrrL++hn+rrrk+++ XP_027154431.1 173 RCQVEGCNLDLSSAKDYHRKHKVCDNHSKCPKVVVAGLERRFCQQCSRFHSLTEFDEKKRSCRRRLSDHNARRRKPRQ 250 6**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence |
MEWNTKSDWD NLISFNSKTS DSLKKLQLTD LVIDDEGEID GGSFDLSGIG GTSGGSGSDL 60 GHGSSGKSSK SVSTDSSPKE GMKTSGLKLQ GSPGAIITEI VPPRADLSRT PSSLETSVVS 120 VEPLIGLKLG KRTYFENSVG SSTKSPGFSV APVSSISTAK KTKSSCQNAT IPRCQVEGCN 180 LDLSSAKDYH RKHKVCDNHS KCPKVVVAGL ERRFCQQCSR FHSLTEFDEK KRSCRRRLSD 240 HNARRRKPRQ ETIQFNRTKL TSSYHDGRKQ MNFSLNNGES IGNPTWENVC SSKFMLTQHF 300 PLKREKVGQP PLPRIELPYA MTMHNKLSNE LLTSKASAAD VFKQGFKESV SSSESAAPEF 360 PRALSLLSTN SWGSSEPEPP ISFDHPLRVY PTTMPLSVIP QALPSEYWQI ETQSSSHTFT 420 GSSNIGGHFQ EIQLFKPPYQ NDIFSNTWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 230 | 247 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 1e-54 | SBP family protein |