PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027154094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 36052.2 Da PI: 6.7076 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.7e-17 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ G g+W++ a++ g++Rt+k+c++rw++yl XP_027154094.1 26 RGPWTLEEDNLLIHYITCNGEGRWNSLAKCAGLKRTGKSCRLRWLNYL 73 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_027154094.1 79 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 122 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MSKGRITTKS TSNPNEEEGS SIDLRRGPWT LEEDNLLIHY ITCNGEGRWN SLAKCAGLKR 60 TGKSCRLRWL NYLKPDIKRG NLTPQEQLLI LELHSKWGNR WSKIAQHLPG RTDNEIKNYW 120 RTRVQKQARQ LNVDSNSKKF LEAIKCFWMP RLLEKMEQSS SLSSSSSISS ISTLDNHNSA 180 SPSLATNKTP LASSSPLADS KKCSSDSVRI MLLQQPAAQS QENPNSSPVQ TYGKNNSACN 240 NSIEEDSCYH VDMTSYPDGE VFSHHQPPEM SAEAMESPDM NFSECQISEA DNWFNDDMSA 300 GAFWNTDELW HFRKPEVGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 4e-88 | MYB family protein |