PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027153304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 372aa MW: 43654.8 Da PI: 8.5517 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.1 | 1.8e-06 | 64 | 85 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg sF+ + +L++H+++H XP_027153304.1 64 TCEHCGVSFRKPAYLRQHMQSH 85 6*******************99 PP | |||||||
2 | zf-C2H2 | 15.8 | 4e-05 | 91 | 115 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 +kC dC+ s++rk++L+rH+ H XP_027153304.1 91 FKCLvaDCHASYRRKDHLTRHLLQH 115 899999***************9887 PP | |||||||
3 | zf-C2H2 | 19.5 | 2.6e-06 | 159 | 183 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk+F+ s L+rH +H XP_027153304.1 159 YVCTeiECGKVFKFASKLRRHEESH 183 99*******************9988 PP | |||||||
4 | zf-C2H2 | 15 | 7e-05 | 250 | 274 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C sFs+ksnL++H + H XP_027153304.1 250 KCSfeGCLLSFSNKSNLNQHVKAvH 274 688889**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MVEEKENKRP VIFRDIRRYY CEYCGICRSK KFLIASHILS HHQEELKQKE EENGQAKDEP 60 KMNTCEHCGV SFRKPAYLRQ HMQSHSFERP FKCLVADCHA SYRRKDHLTR HLLQHQGKLF 120 ECPLDSCKCR FVYQGNMKRH VKEFHYDSSS NDVTSPKQYV CTEIECGKVF KFASKLRRHE 180 ESHVKLDTVE AFCAEPGCMK FFTNGECLKE HVHSCHQYVI CETCGTRQLK KNFKRHLCSH 240 EAGCSQSKVK CSFEGCLLSF SNKSNLNQHV KAVHLGLQPF PCRFPSCGMK FSFKHVRDNH 300 EKSGRHVFTR GDFEESDEQF RSRPRGGRKR QYPVIETLMR KRIVPPCESD PILNEASDYL 360 SRFFSTESED EL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-130 | C2H2 family protein |