PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027151693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23629.3 Da PI: 8.3473 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 56 | 105 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ ++Wv+e r+p +k++r++lg+f t+e+Aa+a++ a+++l+g XP_027151693.1 56 IYRGVRRRN-GNKWVCEMREP---NKKTRIWLGTFQTPEMAARAHDVAALALRG 105 69****887.9******9998...347*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MDFEGYHSST SPSSSSSSPS SSSSSSSDDN CNVTAKSSSH KRKAGRRKFK ETRHPIYRGV 60 RRRNGNKWVC EMREPNKKTR IWLGTFQTPE MAARAHDVAA LALRGDDAAL NFTDSAWRVA 120 RAQSSLASDI QIAALQAAQA FRPSLVDANP SSSSSPKNIC CHSATMFVDE EAVFNMPALI 180 DNMAEGMLLT PPAMKKGFHW DNGEGDDIEL TLWRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25480.1 | 2e-45 | ERF family protein |