PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027149636.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 221aa    MW: 25460.2 Da    PI: 10.2972
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027149636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.7e-161302061599
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      l lp +f ++h  +k ++ t+tl de+g +W+  +  rk++    l++GWk+F  +++L +gD +vF+l++ + f  +v+++r+
  XP_027149636.1 130 TLGLPSHFSKRHL-PK-RDDTVTLVDEQGDKWRTIYLARKTG----LSGGWKKFSVDHDLVDGDALVFQLIQPTVF--KVHIIRE 206
                     488******9994.33.5569***************656665....*************************98888..8988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MVVSKVKYEQ LRQQRMEENK KKLEQLHLPL LSQALQKAAL SPKTSPVMKK VKPRTIRTEL  60
VPVRRSGRFT NKPAPQYKEV VFYERVQLPR STVHPKRDLS NRVYASDEAR AWAIEKAEKL  120
ESTLESGYPT LGLPSHFSKR HLPKRDDTVT LVDEQGDKWR TIYLARKTGL SGGWKKFSVD  180
HDLVDGDALV FQLIQPTVFK VHIIRENGFT EENSHEAICD S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-51B3 family protein