PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148700.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 399aa MW: 43872.5 Da PI: 8.3365

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.4e-32	179	232	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027148700.1 179 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 232 9****************************************************7 PP
2	Myb_DNA-binding	45.4	1.9e-14	180	231	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_027148700.1 180 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 231 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDISACCSPG SLFREKTFRI RNILSSKLVL PHRLLNFYTS NLLTSTDSMR NTGSSFPDLS 60 LQISPPSLRN YDIKEVGYDI GLMVKSSYPS DRSSTTDSGS CGSDLSHENG GFDPERSLSY 120 PSVDPTLSLG FDMAVSNPLP LQPPRNFQAC HHYQPQIYGR DFKRNSRMIN GLKRSVRAPR 180 MRWTSTLHAH FVHAVQLLGG HERATPKSVL ELMNVKDLTL AHVKSHLQMY RTVKSTDKGA 240 AGPIGQTDVV LSQGTGMAEV ESLEAGVELS CEKAGSNPSA NSINISLPSS SPSLPITLHN 300 AQRPSCELPP RTNIWCHPSQ ENSLRCYQHG DKDTKGAGID SLHHMSGKME KKLDSNSTNR 360 SMLASSGMLL NLEFTLGRSS WQLDHDANNT TDLTINLKC

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDISACCSPG SLFREKTFRI RNILSSKLVL PHRLLNFYTS NLLTSTDSMR NTGSSFPDLS  60
LQISPPSLRN YDIKEVGYDI GLMVKSSYPS DRSSTTDSGS CGSDLSHENG GFDPERSLSY  120
PSVDPTLSLG FDMAVSNPLP LQPPRNFQAC HHYQPQIYGR DFKRNSRMIN GLKRSVRAPR  180
MRWTSTLHAH FVHAVQLLGG HERATPKSVL ELMNVKDLTL AHVKSHLQMY RTVKSTDKGA  240
AGPIGQTDVV LSQGTGMAEV ESLEAGVELS CEKAGSNPSA NSINISLPSS SPSLPITLHN  300
AQRPSCELPP RTNIWCHPSQ ENSLRCYQHG DKDTKGAGID SLHHMSGKME KKLDSNSTNR  360
SMLASSGMLL NLEFTLGRSS WQLDHDANNT TDLTINLKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	5e-58	G2-like family protein