PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 28883.9 Da PI: 10.4915 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.9 | 2.7e-16 | 12 | 96 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ffk+l++ dv l lp +fa+++ +kk++++tl+l+++s +W+v + +ry++ GW +F ++n+Lk g f+vF l + s f XP_024996957.1 12 FFKILLRDDVDY---LPLPSSFAKRYLKKKKKNVTLVLKTKSTIKWKVMY--LEIEDRYYFIHGWLNFINDNHLKMGHFLVFWLLSPSIF 96 778887777775...57*********888899******************..999999************************87665655 PP | |||||||
2 | B3 | 47.8 | 2.6e-15 | 157 | 238 | 14 | 99 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + + + k+f+++ g++ + + l+l++ +g++Wevk+ ++++++ ++++GW +F k+n++++gD + F++++ l+v++f+k XP_024996957.1 157 HKMLMTKSFLQDVGMN--GCRRLRLKNVDGKVWEVKV--KRYGRKvaPYMSTGWIKFRKENKIEVGDLCEFSHVK--ANLLRVHIFKK 238 4466678888777877..6789***************..5555555599999********************765..55579999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDLMNNGNGV SFFKILLRDD VDYLPLPSSF AKRYLKKKKK NVTLVLKTKS TIKWKVMYLE 60 IEDRYYFIHG WLNFINDNHL KMGHFLVFWL LSPSIFQVWI YAPNGCLTNP TTTCSGGSKN 120 ENILKKPFIK EEEASDDDSM ESDKKSLKRV ITKNYIHKML MTKSFLQDVG MNGCRRLRLK 180 NVDGKVWEVK VKRYGRKVAP YMSTGWIKFR KENKIEVGDL CEFSHVKANL LRVHIFKKGK 240 QVNKNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31690.1 | 2e-09 | B3 family protein |