PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25137.3 Da PI: 7.5597 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.8e-19 | 127 | 177 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a++ a+ +++g XP_024996676.1 127 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAFAYDTAAYRMRG 177 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MMGNNGFDSD FALLESIRRH LLDDSAINSG IGAPPMHCRS TTTLFPCLSE TWGELPLKEN 60 DSEDMLIARF LHEALDFECL PAPSNSIASV KSEPEILVGS PGVSSYQGES PLQKTAVQGV 120 VEQKGKHYRG VRRRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAAFAYDT AAYRMRGSRA 180 LLNFPLRINS GEPEPVRITS KRRATSPASS SEDRSSKRGK RVETETHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-58 | ERF family protein |