PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | C2H2 | ||||||||
Protein Properties | Length: 665aa MW: 74708.3 Da PI: 8.2527 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 77 | 98 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rH+r+H XP_024996547.1 77 KCDKCAREFCSPINYRRHMRVH 98 7*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 665 aa Download sequence |
MPVAKLLGTG IPDAMKSEEG TDSLDTFIRQ AVGKEPLFSF SRTGDSPMQW IQLLHALDQQ 60 DLPGWPLLAP MKVQMQKCDK CAREFCSPIN YRRHMRVHRR SMNIHKEPQK YRDLLGAFWD 120 KLSYDEAKDI MSFKDVNLEE VPGSSIVRNI AANLRKPVFL SLPQVYVKAG SALVDIVQGR 180 PSRLPISSEE LFSLLDDASE KTFLCAGTAE SLQKYVFDGE AGKIGLEMKN LIACTSFLAE 240 QKLVKAWLAD KDAEALRCQK LLVEEEEAAQ RRQAELLERK RQRKIRQKEQ RAKDHSNGMK 300 VDLYTASDIF ESIPSAETSS SQTSPQVNPL IPDEHVATPL DPSSNEEVVN IEAQGGCSSD 360 HSDTAATEQQ KMQENGSQHF IARWQVPKSQ RGGRNGFHSN QNGNMIKWEQ AQKAREQRVN 420 GSKVWTKKPK FENGGRELVK SRVQNDAIYQ TTQTNCQLMI GSISVTVRNC QAEFEEKVDR 480 EIKTNSVQNG TNRSTLKFWR PRNDTRGQLA YRGNGQILKE NATPENGTLS SENDHQSCDL 540 NGNDIRGTDD SNVQVENSAM PKPMPFSIDA AKAFLAQRWK EAISGDHVKL VLSSVAEQPP 600 GQLDFEENRQ VAESEDPMVV GSSKGRLGKV AEIDSTTHTN VKPKFRTKPE KNMKTKYIPK 660 QRAVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-136 | C2H2 family protein |