PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bZIP | ||||||||
Protein Properties | Length: 414aa MW: 44156.4 Da PI: 6.8084 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 67.9 | 1.7e-21 | 309 | 371 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++++ e+++l +++ XP_024996379.1 309 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENSSLRAEVSRIRSEYDQLLAQN 371 89*********************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MGSSEMDKSI KEAKDTTKEP KTTNSQEQAS GAATGTVNPD WTGFQPYPPM PPHGFLASSP 60 QAHPYMWGVQ HLMPPYGTPP HPYVAMYPHG GIYTHPSMPP GSYPFNPYAM PPNGVTEASG 120 NTPGNVEVDG KSSDGKEKLP IKRSKGSLGS LNMITGKNNE PSKAGASANG VYPKSAESGS 180 DGSSEGSDGN SENDSQMKSG SRQDSIEVTG EASQNGNSAH GSQNGGPNAP HSVVNQTMPV 240 MPVSPSGGPG SIPGPTTNLN IGMDYWSGTN SSNIPAIRGK VTSAPVAGGM VTAGSRDSMQ 300 SQLWLQQDER ELKRQRRKQS NRESARRSRL RKQAECDELA QRAEVLKEEN SSLRAEVSRI 360 RSEYDQLLAQ NASLKERLGE TPGREEVTSS GIEQQKGPKG HQDGQTEQLV QSRE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 326 | 332 | RRSRLRK |
2 | 326 | 333 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-141 | bZIP family protein |