PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024995958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | WRKY | ||||||||
Protein Properties | Length: 297aa MW: 33217.3 Da PI: 10.0905 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.1 | 4.3e-24 | 166 | 224 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+ +W+KYG K gs++pr YY+Ct + +C+v++kv+ +++dp+++++tY+g+Hnh+ XP_024995958.1 166 TDKLSWKKYGAKLADGSPYPRVYYKCTVTnDCKVRRKVQLNRSDPNTLIVTYSGDHNHS 224 6999***********************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MTTTMPMTNT TMTTTIPMTN TTMTTTMPMT NTALPATVGN YNQQNASFSG EALNQHHPMS 60 IKNIKQMLQN SNYPVNIPKI QNPPVPNNNL SMLSLPSHGN IPAASNYHHY PQQQQHQPLP 120 QQNHLHVNQQ SIRVSEHTNV RPHVTTRQSK VKTKRVYKMP VQGLNTDKLS WKKYGAKLAD 180 GSPYPRVYYK CTVTNDCKVR RKVQLNRSDP NTLIVTYSGD HNHSPPSSLN FFTGSSSGKD 240 LLNNHDARVN DETNHPSSSK AITPPTILSF GKKQTQNNND ANKDDDVFGG LEDFMPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-24 | WRKY family protein |