PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024995955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | WRKY | ||||||||
Protein Properties | Length: 128aa MW: 14267.6 Da PI: 4.404 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 55.1 | 1.5e-17 | 2 | 41 | 21 | 59 |
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+ a gC ++k+ver+++dp+v++itY+g+Hnh+ XP_024995955.1 2 QRAYYRCSAAeGCLARKQVERKRSDPSVLIITYTGDHNHP 41 59*******99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MQRAYYRCSA AEGCLARKQV ERKRSDPSVL IITYTGDHNH PMPPKPHFSV DGKSNNAINS 60 HDEDKNENKT TTYSSVSPTA NEAVETTMVE EKDKDADDDN VPNVVMDDDV FEGLDEIINL 120 SDGISCFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 3e-18 | WRKY family protein |