PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995942.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family MIKC_MADS
Protein Properties Length: 207aa    MW: 24138.6 Da    PI: 9.7928
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.32.6e-30958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krienk+nrqvtfskRrng+lKKA+ELSvLCdaev +iifss++klye+ 
  XP_024995942.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSSRDKLYEFG 58
                    79**********************************************95 PP

2K-box103.23.3e-3480169998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++e++++s++qe++kLk++ e+Lqr+qRhllGedL++Ls+keL++Le+qLe +l++ R++K+++++eq+eel++ke+el + nk L+ k+
  XP_024995942.1  80 NNERETQSWYQEVSKLKAKFESLQRTQRHLLGEDLGPLSVKELHNLEKQLEGALTQARQRKTQIMVEQMEELRRKERELGDMNKHLKIKV 169
                     67889*********************************************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVGLIIFSS RDKLYEFGSV  60
GVMKTLERYQ RCCFNPQDNN NERETQSWYQ EVSKLKAKFE SLQRTQRHLL GEDLGPLSVK  120
ELHNLEKQLE GALTQARQRK TQIMVEQMEE LRRKERELGD MNKHLKIKVS HELSTGLDLV  180
YNQFMHGEGS SVQRNMVGES SIHGWVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.19e-89MIKC_MADS family protein