PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024995578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 392aa MW: 41694.9 Da PI: 6.6881 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 65.6 | 9e-21 | 304 | 366 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ +++l +e+ XP_024995578.1 304 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAETLKEENASLRAEVSRIRSDYEQLLAEN 366 89*********************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 392 aa Download sequence |
MGSRDMDKPA KEAKDSAKET PTSQEQSSGN AMGAVPDWTG FQAYSPMPPH GYLASSPQPH 60 PYMWGVQHLM PPYGTAPHPY VAMYPHGGIY AHPSMPPGSY PFSPFAMPSP NGVAEVSGNT 120 PGSMEVNGKS PEGKEKLPIK RSKGSLGSLN MITGKNSEPS KAGASANGSY PKSAESGSEG 180 SSEGSDANSE NNSQMKSGSR QDSMEGEASQ NGNTVHGSQN GGPNTPHSVV NPTMGIVPIS 240 AGATLGSVAG PTTNLNIGMD YWSGANTSNI PAMRGHVTSA PVAGGMVAAG SRESMQPQLW 300 IQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAET LKEENASLRA EVSRIRSDYE 360 QLLAENASLK ERVGESQEEA RENHQTEVVQ SG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 321 | 327 | RRSRLRK |
2 | 321 | 328 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-144 | bZIP family protein |