PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024995214.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 253aa MW: 27782 Da PI: 6.7262

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024995214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.6	7.4e-10	89	135	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 k +r NReA r++R++Kka+ + Le++v L a N++L k++++ XP_024995214.1 89 KGKKRPSGNREAVRKYREKKKARAASLEDEVVRLRALNQQLMKRIQS 135 44555566**********************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MDDGELEFSN HEMFGTTVGD ILSTGSMNGF FDEIFNDTHA CTHTHTCNPS GPDSSHTHTC 60 YHVHTKILPA MSDDDKTPTD DTAESSEKKG KKRPSGNREA VRKYREKKKA RAASLEDEVV 120 RLRALNQQLM KRIQSQVGLE AEVGRLKCLL VDIRGRIDGE IGSFPYQKQH PTNPSLVNPN 180 LGGGFVLNPC NMQRGASVHH DLDLNDCDFE DLPCFGNQGS MPDELPGCGA NNGLRGVNPS 240 AGTKKKRRSC SNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	248	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	1e-78	bZIP family protein