PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024994661.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

NAC

Protein Properties

Length: 277aa MW: 32158.9 Da PI: 8.2009

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024994661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	147.4	7.1e-46	16	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+++yLkk v gk++ + ++i ++iy ++Pw Lp+ k +e+ewyfF++r++k+ +g r+nr+tk+g+Wkatg+d++++s XP_024994661.1 16 LPGFRFHPTEEELLDFYLKKMVLGKNTCF-QIIGVLNIYLYDPWILPELSKVGEREWYFFVPRNRKHGSGGRPNRTTKNGFWKATGSDRKIFSLy 109 59**********************766.89***********8778899**********************************988 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ glkktLvfykgrap g+ktdWvm eyrl XP_024994661.1 110 dTKKHLGLKKTLVFYKGRAPGGSKTDWVMSEYRL 143 78889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MDIEQVEKET RLELQLPGFR FHPTEEELLD FYLKKMVLGK NTCFQIIGVL NIYLYDPWIL 60 PELSKVGERE WYFFVPRNRK HGSGGRPNRT TKNGFWKATG SDRKIFSLYD TKKHLGLKKT 120 LVFYKGRAPG GSKTDWVMSE YRLPDSFPLP KQDIVLCKIY RKATSMKILE QRAAMEEEAH 180 PPPSPSSTTS QRLDLFALPP APLEPTHLPS TDDDFFLEEN TDRKLMLKLP EGADNLSELR 240 LPRSNTDWNP DSQLRSPWLH NLIFTPPPYA NILNFFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-92	NAC family protein