PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024993892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 26489.9 Da PI: 9.0067 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.7 | 1.4e-50 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv++++l++ ++i+e+d+++++PwdLp +e+e +fFs+ + ky++gkr+nr+t sgyWkatg dk+++++ XP_024993892.1 14 LPPGFRFHPTDEELVVQYLKRKVQSHPLPA-SIIPEADVCRSDPWDLP---GDSEQERFFFSTMEIKYPNGKRSNRSTLSGYWKATGLDKQIVNS 104 79****************************.89***************...3467899**********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+g+ p+g+ktdW+mheyrl XP_024993892.1 105 rNNQVVGTKKTLVFYRGKPPTGSKTDWIMHEYRL 138 67888***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 235 aa Download sequence |
MDKLNFLNNG VLRLPPGFRF HPTDEELVVQ YLKRKVQSHP LPASIIPEAD VCRSDPWDLP 60 GDSEQERFFF STMEIKYPNG KRSNRSTLSG YWKATGLDKQ IVNSRNNQVV GTKKTLVFYR 120 GKPPTGSKTD WIMHEYRLVA NPTLNPSQET GKWVLCRIFL KKRGRNGEKK EEEEVKDTIE 180 KTSPIFYEFL AGPTPKDGGL NSEGALSSSG SSGVTNASHM AVPDEDEESS KLRIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-85 | NAC family protein |