PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024993862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 294aa MW: 33998 Da PI: 7.6186 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 9.9e-18 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_024993862.1 21 RGPWTLEEDNLLIRYITCHGEGRWNSLAKSAGLKRTGKSCRLRWLNYL 68 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_024993862.1 74 RGNLTPQEQILILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 117 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MRTTKKMNTS FNEEEFDQLK RGPWTLEEDN LLIRYITCHG EGRWNSLAKS AGLKRTGKSC 60 RLRWLNYLKP DTKRGNLTPQ EQILILELHS KWGNRWSKIA QHLPGRTDNE IKNYWRTRVQ 120 KQARHLKIDS SSKRFVEELQ RFWMPRLLEK VEQTSSSSST STASTSTMET DQNKLSPGPQ 180 IEQTPFAVSS PTRPSNIEHI NSSSNFFASS SSAKMLSQLP EMSQFYADTA FYNSSLQIND 240 TYNLDISEFD MMGFGQPDDM SNLNFQVADT DWISGGDLAA DTYWNMDELW QFKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-79 | MYB family protein |