PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | C2H2 | ||||||||
Protein Properties | Length: 200aa MW: 22595.3 Da PI: 6.6221 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 41 | 63 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H++ H XP_024992302.1 41 YSCSFCRREFRSAQGLGGHMNIH 63 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MWVKRKNIEL MNPFDESWEE EAFAEDGRGP LGGFVWPPRS YSCSFCRREF RSAQGLGGHM 60 NIHRRERARL KQSLNSTTPP HNPSPHQNLF RSANPSFSSS PSSRVSLRTL CSNSDTKSTS 120 CVSDDQVQML LPSPDHGAAV ETNFFLGFRL DSPPPGNGND DHHRFDDEEV MNCKRQKTIV 180 MPLMIMGSIE EVDLELRLGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 1e-26 | C2H2 family protein |