PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 227aa MW: 26043.7 Da PI: 9.122 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 140 | 1.4e-43 | 42 | 172 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppG+rF Pt+eelv++yL +++++++ +l++vi+ v++y++ePw+Lp+ +k ++++w+fF+++++++ +g r++r+t+sgyWkatg+ + v XP_024990620.1 42 PPGYRFFPTEEELVSFYLPNELDARRDDLHRVIPVVNVYEHEPWHLPMeageLCKRDTEQWFFFVPKQEREVQGGRPSRTTASGYWKATGSPTYV 136 89***************************99****************645654445777************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s++++++g+kkt+vfy+g++++++kt+W mheyr+ XP_024990620.1 137 YSSTDKVIGVKKTMVFYHGKSSTSKKTKWKMHEYRA 172 **********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MNRLILSSLP VSVSNPIYTH HHHPPTHRCS VLTTTMNHRL PPPGYRFFPT EEELVSFYLP 60 NELDARRDDL HRVIPVVNVY EHEPWHLPME AGELCKRDTE QWFFFVPKQE REVQGGRPSR 120 TTASGYWKAT GSPTYVYSST DKVIGVKKTM VFYHGKSSTS KKTKWKMHEY RAIKEELDST 180 NTCLIPKLQH ELSLCRVYVI SGCVRAFDRR PTGLGTHEIG GSSSLSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 7e-73 | NAC family protein |