PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989010.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 329aa    MW: 37403.4 Da    PI: 5.6647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.2e-1888138255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ AeIr p +  k++r +lg+f+t+e+Aa a+++a+ k++g
  XP_024989010.1  88 RYRGVRRRP-WGKFTAEIRNPEK--KKARLWLGTFDTPEQAALAYDRAAFKFHG 138
                     7********.**********733..46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MFTLQTLSSF EYPGLENSRA HLNDSSYMKM FPMLNQDDHD HDHDHSQEKS HEPLFCSRFL  60
DGNQADEGGK KKKRPSPERE IQEVEWRRYR GVRRRPWGKF TAEIRNPEKK KARLWLGTFD  120
TPEQAALAYD RAAFKFHGSR AKVNFPLLIG CDDRSVVLTP MQKMTHELHH PSSSMSSSSS  180
SMENGQQRKN CMVDHPTTTA TKVGSEHDSL HDLHLYTSTP YDFSLKNSME APATTITTGN  240
MEEGRKDNDT LWSIFFQSTV QSPTATVTSG VDEVGGGDHD SMWDFQMLPV VEPPSATTTA  300
VRASDVGTDH DPFWDFQMDT LTDDDFLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-24ERF family protein