PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 250aa MW: 29061.9 Da PI: 4.7858 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.6e-15 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEde+l+ +++++G +W+ +r g+ R++k+c++rw +yl XP_024988737.1 10 KGSWSLEEDEKLISYINRYGIWNWSQMPRFAGLSRSGKSCRLRWMNYL 57 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.7e-17 | 63 | 108 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEd+++++ + +lG++ W++Ia++++ gRt++++k++w+++l XP_024988737.1 63 RGNFTKEEDDIILHSHSLLGNR-WSAIASRLP-GRTDNDVKNYWHTHL 108 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MTTPTTALKK GSWSLEEDEK LISYINRYGI WNWSQMPRFA GLSRSGKSCR LRWMNYLKPN 60 VKRGNFTKEE DDIILHSHSL LGNRWSAIAS RLPGRTDNDV KNYWHTHLKK RATEYNLVSE 120 TTEQNDMQSS PTFEAENMEI LQQPDNHMHE FFESCFTSED DSSSSCCTTT SKDHDDEFRA 180 NYFHTGSPGT VDDLQCFWDQ LCPVENLELG NNLYRNMFSD PIFQDSCNDP ISSTYSFYNN 240 DYNTSFLPNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 4e-51 | MYB family protein |