PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024988728.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 264aa MW: 29507.2 Da PI: 6.9718

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024988728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.3	4e-34	19	73	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_024988728.1 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73 79****************************************************8 PP
2	Myb_DNA-binding	63.9	3e-20	21	72	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_024988728.1 21 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 72 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MDVVNGANGI NNTPSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT 60 IYHVKSHLQK YRLAKYLPDS SSEGKAFDQK ESGDMLSSLD GSSGMQITEA LKLQMEVQKR 120 LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ KLSGVLSEVP DNFPESKNAT DAPPIMMDQS 180 AKEVNNDETL SSSSRREPLT PDSSCHLVEN PKGERSVKKQ RMDATYSKQA LGLTHQILES 240 SIRPPFQQQQ QFGHSSGMSV DNED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-79	G2-like family protein