PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | C2H2 | ||||||||
Protein Properties | Length: 377aa MW: 43673.7 Da PI: 6.5755 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00026 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_024988656.1 79 CSyeGCGKTFIDAGALRKHAHIH 101 77779**************9877 PP | |||||||
2 | zf-C2H2 | 15.9 | 3.7e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +Cgk F ++s LkrH H XP_024988656.1 106 YVCHyeNCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 21.7 | 5.4e-07 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_024988656.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP | |||||||
4 | zf-C2H2 | 15.8 | 4e-05 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk++ + + Lk+Hi++H XP_024988656.1 166 HICPypECGKRYAHEYKLKNHIMSH 190 679999******************6 PP | |||||||
5 | zf-C2H2 | 13.2 | 0.00028 | 236 | 261 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + L+ H+r+ H XP_024988656.1 236 YACPyeGCEKAYIHEYKLNLHLRReH 261 89*********************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MEHHSFHNPF ERRTFISSNT PAVKWFKEWV PQDVVATGGR CSVMRWITEA QLNAMKEKSK 60 EVEAIEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHAHI HGERQYVCHY ENCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PECGKRYAHE 180 YKLKNHIMSH HEKNNNNMMV EAPLKYVHIQ PIEKPPPKAP KASTATYASA SSDRPYACPY 240 EGCEKAYIHE YKLNLHLRRE HPGHFPEENP KNAHGNNEMD VGSDHDGNTM KREITKSQKQ 300 NRPKPNVKLP PAKVVQRKVS TAVGNVIKKQ LWPVVKDVYE EEDSEETEED RDNVEDRWGY 360 GDNNNDEDDD EETEYED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-128 | C2H2 family protein |