PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024987017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28170.7 Da PI: 9.8517 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122 | 5.5e-38 | 18 | 146 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +rF Pt+eelv++yL +k++g++ ++l++vi+ v +y++ P +Lpk ++ ++++w+fF++r++++a+g r++r+t+s yWkatg+ v+s XP_024987017.1 18 LRFYPTEEELVSFYLFNKLQGQRtHDLHRVIPVVPVYDHSPCHLPKlageLCRRDTEQWFFFVPRQEREAQGGRPSRTTASXYWKATGSPAYVYS 112 79*******************996677788***************656653444677************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++g+kkt+vfy+g++++ ++t+W m+eyr+ XP_024987017.1 113 SDNKVIGVKKTMVFYEGKSRTVKRTEWKMNEYRA 146 ********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MESKLKTPTT MANPPSILRF YPTEEELVSF YLFNKLQGQR THDLHRVIPV VPVYDHSPCH 60 LPKLAGELCR RDTEQWFFFV PRQEREAQGG RPSRTTASXY WKATGSPAYV YSSDNKVIGV 120 KKTMVFYEGK SRTVKRTEWK MNEYRAIKKD VDNTNTSSVP KLRHELSLCR VYVVSGCTRA 180 FDRRPLGLEP TPMVTSKASQ GAPSSQNAVQ TYKTASPSNC SSPGSSNRMV DTVGNVGLVP 240 EWEWQHLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-84 | NAC family protein |