PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024986770.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 634aa MW: 70696 Da PI: 6.5788

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024986770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.3	1.3e-08	405	442	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + XP_024986770.1 405 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 442 554459******************************88 PP
2	BELL	119.1	2e-38	266	337	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elqk+k+kLl++leeVd+rYk+y++q+++v+ssFeavag g+ak+Y slA+ka+SrhFrcL+d i++q+ XP_024986770.1 266 EFMELQKRKTKLLQMLEEVDRRYKHYCDQMKAVVSSFEAVAGNGAAKVYSSLASKAMSRHFRCLRDSIVSQM 337 679******************************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MAEEEEKIIR GNDIMVGSST GNYNCYTDDH HVNSSSNHNP TTSFETSPLE MFNFESHNPV 60 SHHNSVLFWK GPSPPPSSKP ITDSISAGDF YHFDESSLQR CVFSCEPNER PSQGLSLSLS 120 SANPSTIGIQ PFELARPQEH QYQHHHQQGY FGKSMSIDHD QHHQDMMTQD GFLGKPGNII 180 NSGSDGGEGS SLYNHHQSAQ YNIRSSRYLV PAQELLNEFC NLGSKQHQSD QSPKAKAAAT 240 TSNQWQDHDN MNNATSSKTK SLSSLEFMEL QKRKTKLLQM LEEVDRRYKH YCDQMKAVVS 300 SFEAVAGNGA AKVYSSLASK AMSRHFRCLR DSIVSQMKTT KVAMGEKDVS APGTSRGETP 360 RLRVLDQTLR QQRAFQQMTM MDSHPWRPQR GLPERSVSVL RAWLFEHFLH PYPNDVDKHI 420 LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYVEETKTNQ ETMEGTSDGF NPNPQMDQKP 480 TADELVRIDS ECLSSIINHP EKMDHHRTKT QDHDFHHSFS RVTNSFGAVE LDFSSYNNHH 540 NFGGGGDGGG GTGGVSLTLG LQQHGGGNGT GGGGGGVSLA FSPTSQNSLF YPRDHIEDCQ 600 TAVQYSSLLE GDDQGQNLPY RNLMGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MAEEEEKIIR GNDIMVGSST GNYNCYTDDH HVNSSSNHNP TTSFETSPLE MFNFESHNPV  60
SHHNSVLFWK GPSPPPSSKP ITDSISAGDF YHFDESSLQR CVFSCEPNER PSQGLSLSLS  120
SANPSTIGIQ PFELARPQEH QYQHHHQQGY FGKSMSIDHD QHHQDMMTQD GFLGKPGNII  180
NSGSDGGEGS SLYNHHQSAQ YNIRSSRYLV PAQELLNEFC NLGSKQHQSD QSPKAKAAAT  240
TSNQWQDHDN MNNATSSKTK SLSSLEFMEL QKRKTKLLQM LEEVDRRYKH YCDQMKAVVS  300
SFEAVAGNGA AKVYSSLASK AMSRHFRCLR DSIVSQMKTT KVAMGEKDVS APGTSRGETP  360
RLRVLDQTLR QQRAFQQMTM MDSHPWRPQR GLPERSVSVL RAWLFEHFLH PYPNDVDKHI  420
LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYVEETKTNQ ETMEGTSDGF NPNPQMDQKP  480
TADELVRIDS ECLSSIINHP EKMDHHRTKT QDHDFHHSFS RVTNSFGAVE LDFSSYNNHH  540
NFGGGGDGGG GTGGVSLTLG LQQHGGGNGT GGGGGGVSLA FSPTSQNSLF YPRDHIEDCQ  600
TAVQYSSLLE GDDQGQNLPY RNLMGAQLLH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-139	TALE family protein