PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024986166.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 685aa MW: 74743.1 Da PI: 7.199

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024986166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	402	439	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_024986166.1 402 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 439 554459******************************88 PP
2	BELL	118.9	2.4e-38	262	333	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e qe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai++qi XP_024986166.1 262 EGQEIQMKKAKLVNMLDEVEQRYRQYHHQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAIMGQI 333 579*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MATYYNGSSE IQGGDGLQTL VLMNPGYVYY SDAQQSNQPQ PGNFVFLDSN HPGNNPVNSH 60 QQQANMSHAP PPPPPPSQTQ QFVGIPLSAS PPSSVHSQHD VSSLHAFIPR AQYMYNPVEM 120 VAPPREVTPF QQGLSLSLSS QQSRYGSQAA RVASISPTAG DERRATVGGG GTTSSASGIS 180 NSVNGMHNML LNSKYLKATQ EILEEVVNVG KGVLKNSDQS TKNLTTVGSG DGGSPPPITT 240 EGLSRDETGS KSGGGAELTT AEGQEIQMKK AKLVNMLDEV EQRYRQYHHQ MQIVISWFEQ 300 AAGIGSAKTY TALALQTISK QFRCLKDAIM GQIKAASRSL GEEDSLGGGR KPDGSGSRLK 360 FVDNQLRQQR ALQQLGMIQH NAWRPQRGLP ERSVSVLRAW LFEHFLHPYP KDSDKHMLAK 420 QTGLTRSQVS NWFINARVRL WKPMVEEMYL EEIKEQEQNG LDDHKMSKSE QNEENSSSKL 480 EKSLSPENSN RRFKCTKPEN SFNHASQNIH PPSMSVSTSV STSPTAAGIN FQNPSGFSLI 540 GSLEMEGITQ FSPKKPRNSE RQQQNQDGGF SLTGNPTDFM GGLGGYPIGE IGRFSAEQFQ 600 QQYSGNGVSL TLGLPHCENL SISGTHQSFL PNQNIQLGRG TELGEDNEFG AINPPSSSHS 660 AAMYESMTIQ NRKRFAAQPL PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MATYYNGSSE IQGGDGLQTL VLMNPGYVYY SDAQQSNQPQ PGNFVFLDSN HPGNNPVNSH  60
QQQANMSHAP PPPPPPSQTQ QFVGIPLSAS PPSSVHSQHD VSSLHAFIPR AQYMYNPVEM  120
VAPPREVTPF QQGLSLSLSS QQSRYGSQAA RVASISPTAG DERRATVGGG GTTSSASGIS  180
NSVNGMHNML LNSKYLKATQ EILEEVVNVG KGVLKNSDQS TKNLTTVGSG DGGSPPPITT  240
EGLSRDETGS KSGGGAELTT AEGQEIQMKK AKLVNMLDEV EQRYRQYHHQ MQIVISWFEQ  300
AAGIGSAKTY TALALQTISK QFRCLKDAIM GQIKAASRSL GEEDSLGGGR KPDGSGSRLK  360
FVDNQLRQQR ALQQLGMIQH NAWRPQRGLP ERSVSVLRAW LFEHFLHPYP KDSDKHMLAK  420
QTGLTRSQVS NWFINARVRL WKPMVEEMYL EEIKEQEQNG LDDHKMSKSE QNEENSSSKL  480
EKSLSPENSN RRFKCTKPEN SFNHASQNIH PPSMSVSTSV STSPTAAGIN FQNPSGFSLI  540
GSLEMEGITQ FSPKKPRNSE RQQQNQDGGF SLTGNPTDFM GGLGGYPIGE IGRFSAEQFQ  600
QQYSGNGVSL TLGLPHCENL SISGTHQSFL PNQNIQLGRG TELGEDNEFG AINPPSSSHS  660
AAMYESMTIQ NRKRFAAQPL PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-101	TALE family protein