PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024985436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27759.1 Da PI: 6.1009 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.1e-16 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W eEde+l vk lG ++W++ a++ g++R++k+c++rw +yl XP_024985436.1 11 RGPWLDEEDERLTTIVKALGDKNWDALANESGLRRSGKSCRLRWMNYL 58 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 66 | 109 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T eE+ ++++++kq+G++ W++Ia++++ gRt++++k++w+++l XP_024985436.1 66 EITYEEEHIILNLHKQWGNK-WSRIAKRLP-GRTDNEIKNYWRSHL 109 5689****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MANRDVGNLR RGPWLDEEDE RLTTIVKALG DKNWDALANE SGLRRSGKSC RLRWMNYLRP 60 NLKHGEITYE EEHIILNLHK QWGNKWSRIA KRLPGRTDNE IKNYWRSHLK KKTEAQQGTR 120 NVAEQDLSTP KCHRSPEYII GENERDGVFG TSSTEAPEIS SNMSAFGCSS PYERQITDWM 180 SSCCWLLHDD NQLQTYEIKQ HEDYMGMYPC FCQPESKPEE DMMHNVCDLW SPIWEMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 8e-56 | MYB family protein |