PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024985250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 28840.6 Da PI: 7.8092 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv+ v+++G g+W+++a g++R +k+c++rw +yl XP_024985250.1 15 KGPWTPEEDRLLVHHVNLHGEGRWNSVATLSGLKRNGKSCRLRWVNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56 | 8.9e-18 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T+ E+ +++d+++++G++ W+tIar ++ gRt++++k++w+++ XP_024985250.1 68 RGRITPHEETIILDLHARWGNR-WSTIARSLP-GRTDNEIKNHWRTH 112 899*******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MYWGVMGGAE ERWRKGPWTP EEDRLLVHHV NLHGEGRWNS VATLSGLKRN GKSCRLRWVN 60 YLRPDLKRGR ITPHEETIIL DLHARWGNRW STIARSLPGR TDNEIKNHWR THFKKKSKVS 120 LDESTKLKTK LLKRQKFQQE QRLQQQQLLD QVQQNEADMK KIMSLVVEES TESSPTMVVR 180 EEEEEEEESL IHGMILLNGW FYAPAADHQS SMINQDVGMW DGLWNLDDVH GTNFSATYHQ 240 APCLNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 7e-76 | MYB family protein |