PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985047.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 398aa MW: 45050.9 Da PI: 8.8421

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.4	1.3e-07	121	183	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke ++ rr NRe+Ar +R++a eeL++k++ L eNk Lk + e+ +ke ++lk+ + XP_024985047.1 121 EKEARKIRRVLANRESARQTIRRRQAIYEELTRKAADLAWENKNLKRKKEMASKEFDSLKDMN 183 7999*******************************************9999999999999866 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MADIKVLSSD NVAEEDRMVE IELEAAEALA ELAHVAANRF LTRGGESDSG NPCFNLVESF 60 PKHLFEDQAN FCRKESEKTS IWTAKPVKDE QNAELPSTAS YPTKYASSSG RKSRQRLTEA 120 EKEARKIRRV LANRESARQT IRRRQAIYEE LTRKAADLAW ENKNLKRKKE MASKEFDSLK 180 DMNERLKAQM VKVEADEIHG ESRKSYDELN TCSSSTNSPF IKCNWSPFLP LTITNSSSSD 240 KGVSTITNGI TSPLYVFPHP WLFAFLHNDN EHHPRSFNLN EKPIESSQGS LHSSSSISKA 300 SMPIFPKMVE PETSCSTEAM PAKALDGTQF GGPLTIESKT RSRNLINPVE HIIHEIHQVP 360 VVCSGKKLCD MAAASEARKR RKHLQRQKDL HWRQLRMH

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MADIKVLSSD NVAEEDRMVE IELEAAEALA ELAHVAANRF LTRGGESDSG NPCFNLVESF  60
PKHLFEDQAN FCRKESEKTS IWTAKPVKDE QNAELPSTAS YPTKYASSSG RKSRQRLTEA  120
EKEARKIRRV LANRESARQT IRRRQAIYEE LTRKAADLAW ENKNLKRKKE MASKEFDSLK  180
DMNERLKAQM VKVEADEIHG ESRKSYDELN TCSSSTNSPF IKCNWSPFLP LTITNSSSSD  240
KGVSTITNGI TSPLYVFPHP WLFAFLHNDN EHHPRSFNLN EKPIESSQGS LHSSSSISKA  300
SMPIFPKMVE PETSCSTEAM PAKALDGTQF GGPLTIESKT RSRNLINPVE HIIHEIHQVP  360
VVCSGKKLCD MAAASEARKR RKHLQRQKDL HWRQLRMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-33	bZIP family protein