PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024984784.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 18032.5 Da PI: 9.8978 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.2e-18 | 33 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +g+++AeIrd + ng kr++lg+f taeeAa a+++a +++g XP_024984784.1 33 RYIGVRKRP-WGKFAAEIRDSTRNG--KRVWLGTFNTAEEAALAYDQASYSMRG 83 699******.**********44465..**********************99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MALLTSSQQL NFEYFTYEEF ANADRKEGEK VRRYIGVRKR PWGKFAAEIR DSTRNGKRVW 60 LGTFNTAEEA ALAYDQASYS MRGVSSSLNF SVETVKESLK GIKCCSSKVE GSPAVALKEM 120 HKRRKKSSSL NSKEKKQRTN LLVLEDLGSD LLEELLSSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 4e-38 | ERF family protein |