PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024983626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 23851.4 Da PI: 6.1249 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 48 | 98 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg++ +e+Aa+a++ a+++++g XP_024983626.1 48 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYRNPEMAARAHDVAALSIKG 98 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MITSEPDDCS SNSFTSPSSS PGSTTQPQNP KTRSATIKRS RDTSTKHPVY RGVRMRNWGK 60 WVSEIREPRK KSRIWLGTYR NPEMAARAHD VAALSIKGNS AIINFPDLVG SLPRPVSSSP 120 RDVQAAAAKA AAMDKFDFPP APSTVSSEEL SEITELPILG PSVDSAESSN EFIYIDSVVD 180 GWLYPPQWMH NGADDDGGHV SGQKNAASND FEPILWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 5e-59 | ERF family protein |