PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024982854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 132aa MW: 15627.6 Da PI: 10.4185 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.4 | 1.4e-12 | 11 | 56 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 +g+W eEdell++ v+++G+++W++ + g + Rt+k+c++rw++ XP_024982854.1 11 KGPWKIEEDELLIKHVEEYGPKDWDL-PLSKGhLQRTGKSCRLRWLN 56 79************************.777779************98 PP | |||||||
2 | Myb_DNA-binding | 39.1 | 1.8e-12 | 64 | 105 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +g +++ E + l d+ ++G++ W++Ia +++ gR+ +++k+ w XP_024982854.1 64 KGMFSEMEKQMLFDLQGKYGNK-WAKIATHLP-GRSVYHVKNVW 105 6789******************.*********.********988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MEQRIPIKIK KGPWKIEEDE LLIKHVEEYG PKDWDLPLSK GHLQRTGKSC RLRWLNNYQP 60 NLKKGMFSEM EKQMLFDLQG KYGNKWAKIA THLPGRSVYH VKNVWWMKLS TDVLMIKVIP 120 VMMVFKFVGV LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 8e-35 | MYB family protein |