PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024982738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 214aa MW: 24072.9 Da PI: 5.1987 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.4 | 0.00014 | 169 | 205 | 13 | 54 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 R+++++ + Lr ++P + +++ + +L +Av+Y+ksL XP_024982738.1 169 REKMRKMVNSLRGIVPGgN------RMNTVGVLDEAVKYLKSL 205 79999999********955......9***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MQSDQKHLRQ KTELPLADQV GSGYISNPPI ASLFGQNVDF QPSKICPRNF IIFDRTDNHS 60 QIMYHPAVAQ GFGYPGLNHI KDRMGVRNDM NDRREIESVM KEDSADIDLL LSFEEDEYEE 120 EEEEEVSTGR TQGNDASDTA DSCSSRPLRK SGLGVLSSSC SQKSSERKRE KMRKMVNSLR 180 GIVPGGNRMN TVGVLDEAVK YLKSLKVELQ KVEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 2e-28 | bHLH family protein |